XooNIps User Manual
English
English日本語
English
English日本語
  • Introduction
  • 1. Overview
    • 1. What is XooNIps ?
    • 2. Main features
      • 2.1. Flexible database construction
      • 2.2. Data classification
      • 2.3. Quality-maintenance workflow
      • 2.4. Metadata distribution
      • 2.5. Variety of accessory functions
  • 2. Start guide
    • 1. User's authority
    • 2. Navigator
  • 3. Installation of XooNIps
    • 1. Plan and design a website
      • 1.1. Describe specific purposes of the website.
      • 1.2. Decide functions of the website
      • 1.3. Select software and hardware
      • 1.4. Make a specification document
    • 2. Server structure components
      • 3. OS installation
      • 3.1. Obtain CentOS5
      • 3.2. Procedure of installation
    • 4. Customize CentOS5
      • 4.1. Create an administration account.
      • 4.2. System Update
      • 4.3. Installing the required packages
      • 4.4. Install external programs
      • 4.5. Set up iptables
      • 4.6. Make SELinux invalid
      • 4.7. Set up for Apache
      • 4.8. Setup for MySQL
      • 4.9. Set up for PHP
    • 5. Install XOOPS
      • 5.1. Set up for XOOPS
      • 5.2. Close the XOOPS installation.
    • 6. Install XooNIps
      • 6.1. Set up for XooNIps
      • 6.2. Initial setting and confirmation on XooNIps
      • 6.3. How to install item type modules:
      • 6.4. Precautions on updating XooNIps
      • 6.5. Support modules
  • 4. Site policy and maintenance
    • 1. "Site Policies"
      • 1.1. 'Site Policies' (XooNIps>>Site Policies)
      • 1.2. 'User information' (XooNIps>>Site Policies>>User Information)
      • 1.3. 'Group information' (XooNIps>>Site Policies>>Group Information)
      • 1.4. 'Item Information' (XooNIps>>Site Policies>>Item Information)
      • 1.5. 'Item Types' (XooNIps>Site Policies>Item Information>Item Types)
      • 1.6. 'Import/Export' (XooNIps>>Site Policies>>Item Information>>Import/Export)
      • 1.7. 'Item Comment' (XooNIps>>Site Policies>>Item Information>>Item Comment)
      • 1.8. 'Moderators Privileges' (XooNIps>>Site Policies>>Moderators Privileges)
      • 1.9. 'Positions' (XooNIps>>Site Policies>>Positions)
      • 1.10. 'Rankings' (XooNIps>>Site Policies>>Rankings)
    • 2. "Maintenance"
      • 2.1. 'Maintenance' (XooNIps>>Maintenance)
      • 2.2. 'User Management' (XooNIps>>Maintenance>>User Management)
      • 2.3. 'Item Management' (Maintenance>>Item Management)
      • 2.4. 'User List' (XooNIps>>Maintenance>>User List)
      • 2.5. 'Access Rankings' (XooNIps>>Maintenance>>Access Rankings)
      • 2.6. 'File Search' (XooNIps>>Maintenance>>File Search)
      • 2.7. 'OAI-PMH' (XooNIps>>Maintenance>>OAI-PMH)
  • 5. How to operate a XooNIps database website
    • 1. Guest
      • 1.1. How to search and browse the published items (information):
      • 1.2. Advanced search
      • 1.3. XooNIps Ranking
      • 1.4. Admission/registration
    • 2. Registered user
      • 2.1. Login
      • 2.2. Logout
      • 2.3. Edit private (index) trees
      • 2.4. Item management
      • 2.5. Item publication
      • 2.6. Group
      • 2.7. Item transfer
    • 3. Group administrator
      • 3.1. Manage group members:
      • 3.2. Review and certify shared items
      • 3.3. Withdraw shared items in a group index
      • 3.4. Edit group indexes
      • 3.5. Publish a group index
      • 3.6. Transfer a group administrator's authority
      • 3.7. Change the disk capacity
      • 3.8. Cancel a group
    • 4. Moderator
      • 4.1. Edit Public Index Trees
      • 4.2. Certify users
      • 4.3. Review and certify items
      • 4.4. Withdraw items in public area
      • 4.5. Create/delete a group
      • 4.6. Access log analysis
      • 4.7. Transfer the moderator's authority
    • 5. System administrator
      • 5.1. Change the site policy
      • 5.2. Switch User Accounts
      • 5.3. Export
      • 5.4. Import
      • 5.5. Harvest metadata
      • 5.6. Change the moderator
  • 6. Copyright notice
  • Appendix A
    • 1. Organizations
    • 2. XooNIps based Online Databases
  • Module Credits
  • About XOOPS CMS
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On this page
  • The Laboratory of Neuroinformatics, RIKEN BSI
  • INCF (International Neuroinformatics Coordinating Facility)
  • NIJC (J-Node)
  • J-Node portal
  1. Appendix A

1. Organizations

PreviousAppendix ANext2. XooNIps based Online Databases

Last updated 6 years ago

The Laboratory of Neuroinformatics, RIKEN BSI

The developer of XooNIps, conducting neuroinformatics studies including: database tool development for resource sharing, tool development for data analysis and visualization, computational neuroscience in vision.

INCF (International Neuroinformatics Coordinating Facility)

Established via the OECD Global Science Forum, the International Neuroinformatics Coordinating Facility (INCF) facilitates worldwide cooperation of activities and infrastructures in neuroinformatics-related fields.

NIJC (J-Node)

As the host institution of the INCF Japan Node, the NIJC serves as a gateway between Japan and the world. The NIJC has eight neuroscience databases open to the public under the J-Node portal site.

J-Node portal

http://www.ni.brain.riken.jp/
http://www.incf.org/
http://nijc.brain.riken.jp/
http://www.neuroinf.jp/`